BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024B11SP1|AL428174
(975 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1161 1912 0.0
>3x_Contig1161
Length = 5308
Score = 1912 bits (963), Expect = 0.0
Identities = 972/975 (99%), Gaps = 1/975 (0%)
Strand = Plus / Minus
Query: 1 ttctttccttctttcacggtgtttaattcctaactcatctctcgttaccaatagtacggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5093 ttctttccttctttcacggtgtttaattcctaactcatctctcgttaccaatagtacggt 5034
Query: 61 cggtagcttgcctgctgagaaacgaaaaatctggggcatccggggcatagtcttccgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5033 cggtagcttgcctgctgagaaacgaaaaatctggggcatccggggcatagtcttccgctc 4974
Query: 121 attccggattggtgtattccgtagagcggattcgttcaatccgtatgtatcacgtgatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4973 attccggattggtgtattccgtagagcggattcgttcaatccgtatgtatcacgtgatac 4914
Query: 181 ggattgaagtgatccgaagaaaactcggtagccgttctgttaaatgatggagcaggcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4913 ggattgaagtgatccgaagaaaactcggtagccgttctgttaaatgatggagcaggcttc 4854
Query: 241 caaaggtctataaaagaaccgttctattgaattgaaattacatttaaaaggtttgacagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4853 caaaggtctataaaagaaccgttctattgaattgaaattacatttaaaaggtttgacagt 4794
Query: 301 tcgagacatatcttgataccaggtttgatctttcaatagacgggtgagaatatcattcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4793 tcgagacatatcttgataccaggtttgatctttcaatagacgggtgagaatatcattcaa 4734
Query: 361 cctataaagttggaaatttgatcgtagaatccttttaagtgacaacaggtttgaaacaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4733 cctataaagttggaaatttgatcgtagaatccttttaagtgacaacaggtttgaaacaag 4674
Query: 421 gctgaaatataagaaataataatgtccgttcctattgtgccaacagattttgctcacgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4673 gctgaaatataagaaataataatgtccgttcctattgtgccaacagattttgctcacgct 4614
Query: 481 ccaaaattggaacaattgaagaatgaatttgtggaatgttatgatacagatgattccagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4613 ccaaaattggaacaattgaagaatgaatttgtggaatgttatgatacagatgattccagg 4554
Query: 541 aagttttttataaccagatctcctggtagagttaatttgattggtgaacatatcgattat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4553 aagttttttataaccagatctcctggtagagttaatttgattggtgaacatatcgattat 4494
Query: 601 tgtcagttttcagtgttgccaatggctattgaaaacgatttgatgctagcgctgccgctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4493 tgtcagttttcagtgttgccaatggctattgaaaacgatttgatgctagcg-tgccgctt 4435
Query: 661 aacttctgaaagcgagaatccatccattactttgactaatcatgatagcaattttgctca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4434 aacttctgaaagcgagaatccatccattactttgactaatcatgatagcaattttgctca 4375
Query: 721 gcgtaagttcgacttaccattggatggatccttgattgadattgacccatcagtgtcaga 780
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4374 gcgtaagttcgacttaccattggatggatccttgattgaaattgacccatcagtgtcaga 4315
Query: 781 ctggtccaattatttcaagtgtggcctcctagtcgctcaacaattcttacaagagaaata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4314 ctggtccaattatttcaagtgtggcctcctagtcgctcaacaattcttacaagagaaata 4255
Query: 841 caacttcaagggtccagttcatggtatggaaatctacgtcaagggtgacattcctagcgg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4254 caacttcaagggtccagttcatggtatggaaatctacgtcaagggtgacattcctagcgg 4195
Query: 901 tggtggtttgtcttcaagtgctgccttcatctgtgcggtttctttggcaatcatatactc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4194 tggtggtttgtcttcaagtgctgccttcatctgtgcggtttctttggcaatcatatactc 4135
Query: 961 twatgttcctgcagg 975
| |||||||||||||
Sbjct: 4134 taatgttcctgcagg 4120
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7354
Number of Sequences: 1807
Number of extensions: 7354
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 975
length of database: 10,358,551
effective HSP length: 16
effective length of query: 959
effective length of database: 10,329,639
effective search space: 9906123801
effective search space used: 9906123801
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)